In elementary school, my friends and I always looked forward to lunch. When that initial bell rang, we dashed out to the brown picnic tables, unzipped our brightly colored lunch totes, and start nibbling on the fruit and sandwiches our parents had packed in foil and zip-topped baggies.
As a picky eater, I knew I could count on Mom and Dad to only include my favorite entrées and sides: half of a plain whole wheat peanut butter sandwich, half of a bagel with cream cheese, apple slices, orange slices, or grapes. I was boring and predictable when it came to savory options!
But when it came to my sweet treat, I let them surprise me. I wouldn’t turn up my nose at any type of sugar! They tucked in an assortment of Little Debbie desserts, Chewy Chips Ahoy, Oreos, Keebler elves, and occasionally homemade cookies. (The love-of-baking gene mostly skipped my mom!)
Most of my friends’ parents packed similar sweets, so we usually traded treats at the end of the meal depending on what we felt like that day. We sometimes negotiated for full desserts (one Little Debbie oatmeal crème pie for two Keebler elves!), but more often, we split our sweets instead.
Whoever brought homemade cookies automatically became the most popular kid at the table. Soft, thick, chewy, and full of partially melted chocolate chips from sitting out in the sun at the picnic tables… Those were rarely split or shared, especially when they appeared in my lunch box—it was such a rare occasion!
My mom usually followed the recipe on the back of the Toll House bag of chocolate chips, but since I grew up to be a healthy baking blogger, that didn’t quite work for me anymore! I created my own lightened-up version over a year ago (it’s one of the most popular recipes on the blog!), and today I decided to tackle a bigger challenge: The Ultimate Healthy Gluten-Free Chocolate Chip Cookies!
Yes, the ultimate. Not just good, not just great… The cream of the crop, the best of the best, the recipe that tempts you to sneak one from the cookie jar every time you glance at the kitchen. The cookies that melt in your mouth and taste like little bites of pure bliss.
I have really high standards when it comes to chocolate chip cookies. Perhaps you can tell?… 😉
HOW TO MAKE THE BEST HEALTHY GLUTEN FREE CHOCOLATE CHIP COOKIES
So let’s talk about how to make the best healthy gluten-free chocolate chip cookies! I learned a LOT about how to make the perfect gluten-free cookies in my many rounds of recipe testing, so let’s cover those important details.
The most important part of this recipe is the gluten-free flour blend. Many gluten-free flours can be coarse or grainy, and they often pass off that texture to the finished baked goods. But I didn’t want grainy cookies—I wanted ones with the same soft and chewy texture as regular cookies!
So I tested and tweaked my gluten-free blend umpteen times. I started with millet, brown rice, and tapioca flours, but both of the former ones have that pesky coarser texture. It isn’t noticeable in muffins and cakes, but it’s extremely prominent in cookies! After a few rounds of substituting certain flours and decreasing others, I finally came up with my perfect trio: millet, tapioca, and coconut flours.
Coconut flour ended up being the missing piece of the gluten-free flour puzzle! It isn’t grainy, like many others, and it gave the cookies the smooth texture they needed. However, it is 3 times as absorbent as regular flour, so it is extremely important that you measure it correctly. (I highly recommend a kitchen scale for this!) Any extra coconut flour will dry out your cookies and make them cakey.
Gluten provides structure to baked goods and keeps cookies chewy, so flours without it require an extra ingredient that imitates these properties: xanthan gum. You can find xanthan gum on the baking aisle near the gluten-free flours. It costs a little more than other ingredients, but that small bag will last a long time. (I bought mine a year and a half ago, and I’ve barely used ¼ of the bag!)
Unlike traditional recipes, you must chill this cookie dough and let it rest. Like we talked about before, coconut flour is more absorbent than regular flour, so we need to give it time to absorb the moisture. Chilling also makes the cookie dough stiffer so it won’t spread as much while baking.
For the thickest cookies, drop the cookie dough into rounded scoops that are about as tall as they are wide. (It’s much too sticky to roll into balls between your palms, so please don’t bother to try!) The cookie dough spreads some while baking, but the taller the mounds are, the less they’ll flatten. For thinner, wider cookies, gently flatten the scoops of cookie dough with a spatula before baking.
Just look at those gorgeous beauties! Soft, chewy, and chock full of melty chips… That’s definitely my idea of bliss! And for quality control, I had to eat 3 fresh from the oven. You know, just to be extra sure.
And these cookies definitely passed with flying colors! When you make your own, remember to snap a picture and share it on Instagram using #amyshealthybaking and tagging @amyshealthybaking IN the photo itself! (That guarantees I’ll see your picture! 🙂 ) I’d love to see your healthy gluten-free chocolate chip cookies!
The Ultimate Healthy Gluten-Free Chocolate Chip Cookies
- ½ cup (60g) millet flour (measured like this)
- ½ cup (60g) tapioca flour (measured like this)
- 6 tbsp (42g) coconut flour (measured like this)
- 1 ½ tsp xanthan gum
- 1 ½ tsp baking powder
- ¼ tsp salt
- 4 tbsp (56g) unsalted butter, melted and cooled slightly
- 2 large eggs, room temperature
- 4 tsp vanilla extract
- 1 cup (192g) coconut sugar or light brown sugar (see Notes!)
- 4 tbsp (56g) semi-sweet chocolate chips
- 2 tbsp (28g) miniature chocolate chips, divided
- In a medium bowl, whisk together the millet flour, tapioca flour, coconut flour, xanthan gum, baking powder, and salt. In a separate bowl, whisk together the butter and eggs. Whisk in the vanilla. Stir in the sugar, smearing out any clumps along the side of the bowl. Add in the flour mixture, stirring until incorporated. Fold in the semi-sweet chocolate chips and 1 tablespoon of miniature chocolate chips. Chill the cookie dough for 30 minutes.
- Preheat the oven to 350°F, and line two baking sheets with silicone baking mats or parchment paper.
- Drop the cookie dough into 24 rounded scoops onto the prepared baking sheets. Gently press the remaining miniature chocolate chips into the tops. Bake at 350°F for 10-13 minutes. Cool on the baking sheets for 10 minutes before turning out onto a wire rack.
View Nutrition Information + Weight Watchers Points
Shelby @ Go Eat and Repeat says...
You sound like me when it comes to sugary treats- the more the merrier! I always joke with my boyfriend that even though I say I’m stuffed after dinner, I always have room for dessert. Why wouldn’t I?? These cookies look great and if you say they are amazing then they must be really fantastic!
I always have room for dessert after dinner too Shelby — I purposely say that I’m full a little early just for that sweet treat! 😉
Eve ~ Baking the Day says...
Homemade cookies win hands-down anyday against shop-bought products; homemade baking ismuch more natural. These cookies look so irresistible, I loved your gluten-free flour trio for the cookies too! Also, even though this is a healthy blog, I love it how you use butter instead of the fake spreads and margarines; it is actually better for you health wise and taste wise.
Thanks Eve! I prefer homemade goodies too — it’s why my freezer is crammed full of cookies!
Dear Amy, these cookies sound wonderful and they look so soft and delicious. xo, Catherine
Thank you so much Catherine!
Ohh my gosh I love that you guys shared your desserts!! You knew how to ensure complete satisfaction at a young age. These cookies look so good.
Thanks Brittany! I wish you had been at my lunch table. We would’ve had so much fun!
Thalia @ butter and brioche says...
Healthy chocolate chip cookies? YES PLEASE. I’ll take 10 Amy!
How about I bake a batch just for you so you can have all 12 Thalia? 😉
Hey!! Could you use whole wheat flour instead? I don’t have all those ingredients. Thanks!!
If you aren’t gluten-intolerant, then I recommend either this recipe or this recipe of mine instead. They’re both very similar to this and for regular classic chocolate chip cookies but don’t use all of the gluten-free flours. I hope you enjoy them if you try them Samantha! 🙂
Great thanks! Made your oatmeal cookies tonight. Yummy!
I’m so glad you enjoyed them Samantha! 🙂
Amy – do you know if these cookies could be made with baking stevia (or splenda – I know it’s not good for you, but it would keep the bulk in the recipe)? I don’t have experience using baking stevia in cookies, but it requires using half as much as the sugar (and it seems to quickly dissolve??), so I’m not sure what to expect from substituting! Thanks!
Yes! The recipe could definitely be tweaked to be baked with Splenda, although baking stevia would be slightly more difficult. If using the cup-for-cup version of Splenda, you could do a straight substitution. If using baking stevia, you’d need to add anywhere from 3-6 tablespoons of milk to the cookie dough to compensate for the missing volume, and the cookies’ texture may be slightly different. I’d love to hear what you try and how they turn out Shawna!
Hi! I tweaked your recipe to be dairy-free and shared it on my blog. I linked you to the original recipe. 🙂
I’m so glad you enjoyed the cookies Autumn! 🙂
Could I double this recipe? I’d like to make these today… 🙂
oh, and is 4 tsp of vanilla really correct? That would be almost 3 Tablespoons if I doubled it! Honestly I’m a little worried to use that much it seems like A LOT esp. for only 24 cookies! I used too much vanilla for a cake once and some people said it tasted like alcohol…
Yes, you can double the recipe if you’d like 4 dozen cookies! 🙂 And the amount of vanilla extract is correct. I explain more about why I use more vanilla extract than typical cookie recipes in this blog post of mine. I can’t wait to hear what you think of the cookies Anna!
I don’t know why, but the most i’m able to get out of this recipe is 17 cookies, not 24. How big do you make them? Mine are just under 2 inches in diameter, not very big.
Mine are generally around 1.75 inches in diameter, although it really depends on how thick I make the cookies. Sometimes I make them thicker, which means they’re not as wide and closer to 1.5 inches, and sometimes I make them thinner, which means they’re wider and closer to 2 inches. To make sure I get all 24 cookies, I drop the cookie dough onto the baking sheets in what I think will be slightly less than each cookie really “deserves,” and then divide up the remaining dough between those 24 mounds of cookie dough on the baking sheets to make them even. 🙂 I hope you’re enjoying the cookies’ flavor Sarah!
Amy this cookie recipe is perfect! They are so fluffy! Wow, thank you 🙂
I’m so glad you loved the cookies David! 🙂